… Pathogenesis Alexander Morgan Marc Colosimo This MSR has focused on the development of tools to analyze infectious pathogens. This MSR has focused on the development of tools to analyze … at the AMIA November meeting. 4 http://sourceforge.net/projects/carafe 5 http://www.alias-i.com/lingpipe 17 7 Biomedical Ontologies Under this MSR, we have become heavily involved in … Do Text?” Bioinformatics 2005 21(23):4199-4200 (2005). 14. Hirschman, L., Damianos, L. “Mining Online Media for Global Disease Outbreak Monitoring,” in AMS-DIMACS volume on Epidemiology, Eds. …